Got this reply...........
Thank you for contacting RootsWeb in regard to uploading your Gedcom file.
We apologize for the frustration you have had uploading your Gedcom file. We are aware of this issue and our technical department is working on a resolution to correct this. We don't have a time frame as to when this will be completed but we do appreciate your patience while we work to fix this issue.
If there is anything else with which we might assist you, please let us know.
RootsWeb Support Team http://rootsweb.ancestry.com